Ninja Resurrection (1997)

Set in the time of the Tokugawa regime, where the Shogun has outlawed the Japanese Christians, since they fear that their religion will incite rebellion and chaos. However, they believe in a prophecy, that a man named Tenshi, will hoist the cross and become the new Jesus. But there is a darker prophecy, if Tenshi does not become Christ, he will return and be reborn as Satan. Jubei Yagyu and a few others can fight against the looming evil that is to come.